Primary Citation PubMed: 10074947
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The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis.
(2012) Nature 491
PubMed: 23064227 | PubMedCentral: PMC3493678 | DOI: 10.1038/nature11502
The structure was solved by molecular replacement with the program Phaser 38 using the structure of Nuc, a bacterial PLD-family nuclease (PDB: 1BYR) as a search model 18 .
b) In Nuc (PDB ID 1BYR 18 ), which acts on double-stranded DNA, the equivalent groove is significantly wider.
Publication Year: 2012
Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
(2004) PLoS Biol 2
PubMed: 15103394 | PubMedCentral: PMC393292 | DOI: 10.1371/journal.pbio.0020162
The AS variants, with accession numbers AK095301 and BC007828, are aligned to the SCOP domain d.136.1.1 and corresponding PDB structure 1byr.
Publication Year: 2004
Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
(2014) Nucleic Acids Res 42
PubMed: 25429979 | PubMedCentral: PMC4267654 | DOI: 10.1093/nar/gku1237
A DALI search ( 35 ) against the Protein Data Bank (PDB) database of protein structures revealed significant structural similarities between the N-terminal domain of R.NgoAVII and several PLD ... ucleases: BfiI REase N-terminal domain (PDB ID: 2C1L, Z-score 12.6); phospholipase D (PDB ID: 1BYS, Z-score 12.3) and Nuc nuclease (PDB ID: 1BYR, Z-score 12.3).
Publication Year: 2014
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