Citations in PubMed

Primary Citation PubMed: 7599119 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Rosetta in CAPRI rounds 13-19.

(2010) Proteins 78

PubMed: 20597089 | PubMedCentral: PMC2952713 | DOI: 10.1002/prot.22784

Target 40: API-A and Trypsin The bound structure of the double-headed arrowhead protease inhibitor-A (API-A) was provided by the contributors, together with an unbound structure of bovine trypsin (PDB... entry 1BTY 21 ).

Publication Year: 2010

SwarmDock and the use of normal modes in protein-protein docking.

(2010) Int J Mol Sci 11

PubMed: 21152290 | PubMedCentral: PMC2996808 | DOI: 10.3390/ijms11103623

For target 40, both trypsin binding sites of the double-headed arrowhead inhibitor complex (pdb 3E8L) were predicted, one with medium accuracy and the other with high accuracy, by docking unbound bovi... e trypsin (pdb 1BTY [ 70 ]) to the bound form of the inhibitor.

Publication Year: 2010

Rapid and accurate prediction and scoring of water molecules in protein binding sites.

(2012) PLoS One 7

PubMed: 22396746 | PubMedCentral: PMC3291545 | DOI: 10.1371/journal.pone.0032036

Protein PDB code Resolution (Å) Ligand BRD4 2OSS 1.35 None BRD4 3MXF 1.6 JQ1 Trypsin 1SOQ 1.02 None Trypsin 1BTY 1.5 Benzamidine HSP 90 a 1AH6 1.8 None HSP 90 1AM1 2 ADP Penicillopepsin a 3APP... 1.8 None Penicillopepsin 1BXQ 1.41 PPi3 Cytochrome P450 2B4 1PO5 1.6 None Cytochrome P450 2B4 1SUO 1.9 4-(4-chlorophenyl) imidazole PIM1 kinase a 1YWV 2 None PIM1 kinase 1XWS 1.8 BI1 Purine nucleoside phosphorylase 1V48 2.2 DFPP-G GluA2 ligand binding core 1FTM 1.7 AMPA HIV-1 protease 1KZK 1.09 JE-2147 a Structures that were selected for molecular dynamics simulations.

Publication Year: 2012