Citations in PubMed

Primary Citation PubMed: 10331873 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 3

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

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Crystal structure of an active form of human MMP-1.

(2006) J Mol Biol 362

PubMed: 16890240 | PubMedCentral: PMC1885970 | DOI: 10.1016/j.jmb.2006.06.079

The peptide was modelled on the known structure of one of the chains of the triple-helical collagen (PDB code: 1BKV).

Publication Year: 2006


Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patterns.

(2011) BMC Genomics 12 Suppl 4

PubMed: 22369665 | PubMedCentral: PMC3287581 | DOI: 10.1186/1471-2164-12-S4-S12

Three proteins with very different shapes were selected (a globin, PDB:1A6M; a porin, PDB:2ZFG; and a collagen, PDB:1BKV), and the topology of the contact graph obtained with different cutoffs is show... (6.0 Å, 9.0 Å and 12.0 Å).

Publication Year: 2011


Polarized Raman anisotropic response of collagen in tendon: towards 3D orientation mapping of collagen in tissues.

(2013) PLoS One 8

PubMed: 23691057 | PubMedCentral: PMC3655185 | DOI: 10.1371/journal.pone.0063518

Four different crystal structures of a collagen-like peptide and one alpha helix were selected in the Protein Data Bank (PDB, ) with the following identification numbers: for collagen-like peptides (1... AG [28] , 1BKV [29] , 1CGD [30] , 1QSU [31] ) and for an alpha-helix section of the protein: (1 XQ8 [32] ).

To account for this the amide I response was averaged over 8 angles ω for “in plane” and “out of plane” positions of the collagen like-peptide structure ID:1BKV ( Fig. 4 ).

3) for four different collagen-like peptide structures (ID: 1CAG, 1BKV, 1CGD, 1QSU) that are rotated in the plane XZ (from (φ = 90°, θ = 90°) to (φ = 0°,θ = 90°)).

Publication Year: 2013