Primary Citation PubMed: 10331873
Citations in PubMed
This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.
Data mentions are occurrences of PDB IDs in the full text articles from the
PubMedCentral Open Access Subset
of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed.
Article titles can be filtered by keywords and sorted by year.
Crystal structure of an active form of human MMP-1.
(2006) J Mol Biol 362
PubMed: 16890240 | PubMedCentral: PMC1885970 | DOI: 10.1016/j.jmb.2006.06.079
The peptide was modelled on the known structure of one of the chains of the triple-helical collagen (PDB code: 1BKV).
Publication Year: 2006
Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patterns.
(2011) BMC Genomics 12 Suppl 4
PubMed: 22369665 | PubMedCentral: PMC3287581 | DOI: 10.1186/1471-2164-12-S4-S12
Three proteins with very different shapes were selected (a globin, PDB:1A6M; a porin, PDB:2ZFG; and a collagen, PDB:1BKV), and the topology of the contact graph obtained with different cutoffs is show... (6.0 Å, 9.0 Å and 12.0 Å).
Publication Year: 2011
Polarized Raman anisotropic response of collagen in tendon: towards 3D orientation mapping of collagen in tissues.
(2013) PLoS One 8
PubMed: 23691057 | PubMedCentral: PMC3655185 | DOI: 10.1371/journal.pone.0063518
Four different crystal structures of a collagen-like peptide and one alpha helix were selected in the Protein Data Bank (PDB, ) with the following identification numbers: for collagen-like peptides (1... AG  , 1BKV  , 1CGD  , 1QSU  ) and for an alpha-helix section of the protein: (1 XQ8  ).
To account for this the amide I response was averaged over 8 angles ω for “in plane” and “out of plane” positions of the collagen like-peptide structure ID:1BKV ( Fig. 4 ).
3) for four different collagen-like peptide structures (ID: 1CAG, 1BKV, 1CGD, 1QSU) that are rotated in the plane XZ (from (φ = 90°, θ = 90°) to (φ = 0°,θ = 90°)).
Publication Year: 2013
The RCSB PDB (citation) is managed by two members of the Research Collaboratory for Structural Bioinformatics:
RCSB PDB is a member of the
The RCSB PDB is funded by a grant (DBI-1338415) from the
National Science Foundation, the
National Institutes of Health, and the
US Department of Energy.