Primary Citation PubMed: 9477945
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Improved prediction of critical residues for protein function based on network and phylogenetic analyses.
(2005) BMC Bioinformatics 6
PubMed: 16124876 | PubMedCentral: PMC1208857 | DOI: 10.1186/1471-2105-6-213
The 128 PDB names used in this set are: 1a3c, 1a6q, 1a7j, 1aac, 1ac5, 1ah7, 1ak1, 1ako, 1amj, 1an8, 1apq, 1arv, 1atg, 1auz, 1ayl, 1ayx, 1az9, 1b64, 1bag, 1bdb, 1bea, 1bfd, 1bia, 1bif, 1bix, 1bk0, 1bli... 1bn5, 1bor, 1boy, 1bp1, 1bqk, 1brt, 1btl, 1c25, 1ca1, 1cby, 1cex, 1cfb, 1chc, 1chd, 1csh, 1ctn, 1ctt, 1cvl, 1dmr, 1drw, 1dxy, 1ecl, 1eh2, 1emn, 1esl, 1eut, 1far, 1fnc, 1gca, 1htn, 1hyt, 1iba, 1ido, 1iow, 1iyu, 1kcw, 1kpf, 1lam, 1lay, 1lbu, 1lgr, 1lml, 1lox, 1mfs, 1mla, 1mrp, 1mup, 1nif, 1opc, 1pda, 1pdc, 1pfo, 1phd, 1phm, 1pii, 1pkp, 1poa, 1poc, 1rfs, 1rie, 1rkd, 1rlw, 1skf, 1snc, 1sra, 1thx, 1uch, 1uox, 1ush, 1whi, 1wod, 1xbd, 1xpa, 1ytw, 2abk, 2adr, 2af8, 2cba, 2cmd, 2dkb, 2dri, 2fha, 2fua, 2liv, 2mcm, 2mnr, 2rn2, 2sas, 2vil, 3dfr, 3dni, 3ebx, 3gcb, 3pte, 3ssi, 3tgl, 4enl, 4icb, 4pah, 5eat and 7rsa.
Publication Year: 2005
Efficient identification of critical residues based only on protein structure by network analysis.
(2007) PLoS One 2
PubMed: 17502913 | PubMedCentral: PMC1855080 | DOI: 10.1371/journal.pone.0000421
Publication Year: 2007
Comparative domain modeling of human EGF-like module EMR2 and study of interaction of the fourth domain of EGF with chondroitin 4-sulphate.
(2011) J Biomed Res 25
PubMed: 23554678 | PubMedCentral: PMC3596701 | DOI: 10.1016/S1674-8301(11)60013-4
The first domain 3-D structure was constructed by using three different templates i.e. EGF domain 1, 2, and 5 of human EMR2 with barium (pdb id: 2BO2), EGF-like module of human C1R (pdb id: 1APQ) and ... ibrillin-1CB EGF protein (pdb id: 1LMJ_A).
Publication Year: 2011
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