Primary Citation PubMed: 8159679
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Ribonuclease A homologues of the zebrafish: polymorphism, crystal structures of two representatives and their evolutionary implications.
(2008) J Mol Biol 380
PubMed: 18508078 | PubMedCentral: PMC2582337 | DOI: 10.1016/j.jmb.2008.04.070
72 For RNase ZF-1a, the search model was derived from the coordinates of [Met(–1)]-hAng (PDB entry 1ANG 29 ) while for RNase ZF-3e, it was derived from those of RNase ZF-1a.
Publication Year: 2008
Mutational dynamics of murine angiogenin duplicates.
(2010) BMC Evol Biol 10
PubMed: 20950426 | PubMedCentral: PMC2964713 | DOI: 10.1186/1471-2148-10-310
Table 1 Residues in the Ang protein involved in intramolecular coevolution Groups of coevolution Amino acids G1 S4, K60 G2 S4, N102 G3 I29, R66 G4 D41, N49 G5 D41, N59 G6 D41, N61 G7 D41, N63 G8 D41, ... 67 G9 D41, K82 G10 L69,K73,Q93,A98,N102 G11 L69,T80 G12 K73,H84,Q93,T97,A98 G13 K73,Q93,A98,N102,G110 G14 K82,P88 G15 K82,Q93,T97,A98,N102 G16 H84,W89,Q93,T97 G17 H84,A98,G110 G18 H84,W89,121 G19 W89,G110 Amino acid position and residue (in one-letter code taking as a reference sequence the H. sapiens sequence from the 1ANG pdb file) of the detected amino acids is included.
The structural PDB file for hANG (1ang, [ 16 ]) was used to identify the co-evolving amino acid positions in the structure (for example, all the amino acid positions in this study refer to their location in the hAng three-dimensional structure).
hAng, mAng1 and mAng4 structures belong to the 1ANG, 2BWL and 2J4T protein databank files, respectively.
Publication Year: 2010
CLICK--topology-independent comparison of biomolecular 3D structures.
(2011) Nucleic Acids Res 39
PubMed: 21602266 | PubMedCentral: PMC3125785 | DOI: 10.1093/nar/gkr393
(i) A conventional structural alignment between a pair of proteins (PDB codes 1ANG and 7RSA) that are ∼35% identical in sequence and similar in overall topology.
Publication Year: 2011
Structural and molecular insights into the mechanism of action of human angiogenin-ALS variants in neurons.
(2012) Nat Commun 3
PubMed: 23047679 | PubMedCentral: PMC3493651 | DOI: 10.1038/ncomms2126
Initial phases were calculated by molecular replacement method using MOLREP software suite from CCP4 package 61 and native ANG (PDB ID: 1ANG 30 ) as the starting model.
Publication Year: 2012
Crystal structure of human angiogenin with an engineered loop exhibits conformational flexibility at the functional regions of the molecule.
(2013) FEBS Open Bio 3
PubMed: 23772376 | PubMedCentral: PMC3668512 | DOI: 10.1016/j.fob.2012.12.003
Initial phases for AEH molecule were obtained by molecular replacement method using the human ANG structure (PDB ID: 1ANG; [ 11 ]) as the starting model.
Publication Year: 2013
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