Citations in PubMed

Primary Citation PubMed: 10930827 Citations in PubMed

PDB ID Mentions in PubMed Central Article count: 6

Citations in PubMed

This linkout lists citations, indexed by PubMed, to the Primary Citation for this PDB ID.

PDB ID Mentions in PubMed Central

Data mentions are occurrences of PDB IDs in the full text articles from the PubMedCentral Open Access Subset of currently about 1 million articles. For each article, the sentences containing the PDB ID are listed. Article titles can be filtered by keywords and sorted by year.

  • 3 per page
  • 5 per page
  • 10 per page
  • view all
  • Publication Year
  • Ascending
  • Descending

Ensembl 2006.

(2006) Nucleic Acids Res 34

PubMed: 16381931 | PubMedCentral: PMC1347495 | DOI: 10.1093/nar/gkj133

The PDB_spice DAS track shows a link to the PDB entry 1A3N chain B.

Publication Year: 2006


Recruitment of rare 3-grams at functional sites: is this a mechanism for increasing enzyme specificity?

(2007) BMC Bioinformatics 8

PubMed: 17598909 | PubMedCentral: PMC1950313 | DOI: 10.1186/1471-2105-8-226

The deoxy hemoglobin structure (PDB:1A3N [60]) is shown in Panel A.

Publication Year: 2007


Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models.

(2007) Acta Crystallogr D Biol Crystallogr 63

PubMed: 17452785 | PubMedCentral: PMC2483474 | DOI: 10.1107/S0907444907009791

Table 1 X-ray structural data used in this study PDB code d min (Å) R / R free Mean ADP (Å 2 ) Total chains Total residues Reference 1a0j 1.70 0.17/0.22 22.9 2 892 Kishan et al. (1997 ... #x025b6; ) 1a3n 1.80 0.17/0.22 16.2 4 572 J. Tame & B. Vallone, unpublished work 1bmb 1.80 0.19/0.22 22.5 2 106 Ettmayer et al. (1999 ▶ ) 1aof 2.00 0.16/0.20 25.8 2 1074 Williams et al. (1997 ▶ ) 1c2t 2.10 0.23/0.26 31.7 1 418 Greasley et al. (1999 ▶ ) 1uyi 2.20 0.18/0.22 28.3 1 209 Wright et al. (2004 ▶ ) 1rg5 2.50 0.16/0.18 52.9 3 824 Roszak et al. (2004 ▶ ) 1p4t 2.55 0.23/0.26 39.1 1 155 Vandeputte-Rutten et al. (2003 ▶ ) 1cqp 2.60 0.19/0.26 36.2 2 364 Kallen et al. (1999 ▶ ) 1c1z 2.88 0.24/0.24 55.3 1 326 Schwarzenbacher et al. (1999 ▶ ) Table 2 Characteristics of multiple rebuilt models       SD of models (precision, Å) R.m.s.d. among models (Å) R.m.s.d. between models and re-refined PDB entry (Å) PDB code d min (Å) ML estimate of coordinate error (Å) Main chain Side chain Main chain Side chain Main chain Side chain 1a0j 1.70 0.28 0.05 0.47 0.07 0.66 0.10 0.95 1a3n 1.80 0.35 0.03 0.38 0.04 0.54 0.06 0.68 1bmb 1.80 0.29 0.05 0.42 0.07 0.59 0.07 0.71 1aof 2.00 0.31 0.05 0.38 0.07 0.54 0.10 0.66 1c2t 2.10 0.41 0.13 0.56 0.18 0.79 0.19 0.98 1uyi 2.20 0.38 0.08 0.43 0.11 0.61 0.12 0.84 1rg5 2.50 0.44 0.14 0.44 0.20 0.62 0.18 0.62 1p4t 2.55 0.40 0.27 0.57 0.38 0.81 0.36 0.84 1cqp 2.60 0.41 0.12 0.53 0.17 0.75 0.18 0.93 1c1z 2.88 0.48 0.62 1.50 0.88 2.12 0.80 2.15 Table 3 Ensembles built using synthetic data     SD of models (precision, Å) R.m.s.d. from ‘mean perfect structure’ (Å) Resolution (Å) Mean free R factor Main chain Side chain Main chain Side chain 1.75 0.24 0.19 0.68 0.39 1.15 2.0 0.23 0.20 0.63 0.39 1.11 2.5 0.22 0.22 0.75 0.39 1.17 3.0 0.26 0.32 0.81 0.49 1.26 3.5 0.26 0.48 1.07 0.61 1.43 4.0 0.31 0.76 1.78 0.84 1.93 4.5 0.40 1.01 2.44 1.17 2.81 Table 4 Ensembles built using synthetic data at a resolution of 1.75 Å, beginning from different starting models       R.m.s.d. among models in ensemble (Å) R.m.s.d. between models and models in ensemble 1 (Å) Ensemble Main-chain r.m.s.d. of starting model from ensemble 1 (Å) Mean free R factor of structures in ensemble Main chain Side chain Main chain Side chain 1 0.00 0.24 0.19 0.72 — — 2 0.22 0.24 0.21 0.65 0.24 0.75 3 0.31 0.24 0.19 0.66 0.20 0.74 4 0.43 0.24 0.18 0.78 0.22 0.88 5 0.58 0.24 0.24 0.72 0.30 0.84 6 0.87 0.24 0.16 0.65 0.27 0.86 7 1.12 0.27 0.49 1.21 0.51 1.35

Publication Year: 2007


Structure of the altitude adapted hemoglobin of guinea pig in the R2-state.

(2010) PLoS One 5

PubMed: 20811494 | PubMedCentral: PMC2927554 | DOI: 10.1371/journal.pone.0012389

Furthermore the position of His97 in human hemoglobin is shown in the T-state (grey, PDB-code: 1A3N, [36] ), R-state (orange, PDB-code: 1HHO, [37] ) and R2-state (light... blue, PDB-code: 1BBB, [10] ).

The guinea pig hemoglobin structure is shown in cartoon representation, which is colored according to the distance between corresponding C α -atoms in guinea pig hemoglobin and the respective conformational state of human hemoglobin in (A) T-state (PDB-code: 1A3N, [36] ), (B) R-state (PDB-code: 1HHO, [37] ) and (C) R2-state (PDB-code: 1BBB, [10] ).

Publication Year: 2010


Influence of reactive species on the modification of biomolecules generated from the soft plasma.

(2015) Sci Rep 5

PubMed: 25649786 | PubMedCentral: PMC4316168 | DOI: 10.1038/srep08221

Binding sites of human (a) Hb (PDB:1A3N) and (b) Mb (PDB:3RGK) protein receptor.

The X-ray crystallographic structures of Hb (PDB:1A3N) 76 and Mb (PDB:3RGK) 77 protein receptor were taken from the protein data bank (PDB) and modified further for docking calculations.

Publication Year: 2015


PubMed ID is not available.

Published in 2014

PubMedCentral: PMC4353013

Figure 1 Left: View of the interdimer α 1 β 2 interface of T-state Hb (PDB code 1A3N), 8 emphasizing the “allosteric core” (E and F helices and FG corner).

Figure 7 Overlay of heme, the proximal histidine, and relevant contacting residues for the initial (light brown) and intermediate (green) PELE structures, and for deoxyHb (PDB 1A3N; 8 cyan).

d RMSD of α carbon displacements (Å) between the PELE intermediate and the deoxyHb crystal structure (1A3N) 8 for the α 1 (left) or β 1 (right) subunits.

Publication Year: 2014