1PYJ

Solution Structure of an O6-[4-oxo-4-(3-pyridyl)butyl]guanine adduct in an 11mer DNA duplex

Structural Biology Knowledgebase: 1PYJ SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria:

wwPDB Validation report is not available for this NMR entry.


Literature

Macromolecules
Sequence Display for 1PYJ

Classification: DNA

Total Structure Weight: 6855.63

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*AP*TP*AP*TP*GP*GP*CP*CP*C)-3' A 11 synthetic
5'-D*GP*GP*GP*CP*CP*AP*TP*AP*TP*GP*G)-3' B 11 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
XPB
Query on XPB
A DNA LINKING C19 H23 N6 O8 P DG

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: --

Structure Validation

Validation report is not available for this NMR entry.



Entry History

Deposition Data

  • Deposited Date: 2003-07-09
  • Released Date: 2004-04-20
  • Deposition author(s): Peterson, L.A., Vu, C., Hingerty, B.E., Broyde, S., Cosman, M.

Revision History

  • 2014-08-06
    Type: Non-polymer description | Details: Corrected covalent adduct representation
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4