1PVL

STRUCTURE OF THE PANTON-VALENTINE LEUCOCIDIN F COMPONENT FROM STAPHYLOCOCCUS AUREUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1PVL

Classification: LEUCOTOXIN

Total Structure Weight: 34884.83

Macromolecule Entities
Molecule Chains Length Organism Details
LEUCOCIDIN A 301 Staphylococcus aureus Mutation: S247R, I257N, N258Q, F259L, N260H, H269E, I270N
Gene Name(s): lukF-PV hlgB_1 hlgB_2 lukF- PV LukPV-F lukPV-F lukPVF ERS092844_00912 ERS195423_02281 ERS365775_02283 ERS410449_02196 ERS411009_00935 ERS411017_01479 ERS445051_01379 SASCBU26_01394
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MES
Query on MES

A 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.201
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.74 α = 90.00
b = 72.38 β = 90.00
c = 98.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-01-12
  • Released Date: 1999-06-15
  • Deposition author(s): Pedelacq, J.D., Mourey, L., Maveyraud, L., Prevost, G., Samama, J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4