1PT6

I domain from human integrin alpha1-beta1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 1PT6

Classification: CELL ADHESION

Total Structure Weight: 47458.04

Macromolecule Entities
Molecule Chains Length Organism Details
Integrin alpha-1 A, B 213 Homo sapiens Fragment: residue 136-338
Gene Name(s): ITGA1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.191
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 37.47 α = 90.00
b = 97.60 β = 103.63
c = 53.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-23
  • Released Date: 2004-04-13
  • Deposition author(s): Nymalm, Y., Puranen, J.S., Nyholm, T.K.M., Kapyla, J., Kidron, H., Pentikainen, O., Airenne, T.T., Heino, J., Slotte, J.P., Johnson, M.S., Salminen, T.A.

Revision History

  • Version 1_0: 2004-04-13

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description