1POV

ROLE AND MECHANISM OF THE MATURATION CLEAVAGE OF VP0 IN POLIOVIRUS ASSEMBLY: STRUCTURE OF THE EMPTY CAPSID ASSEMBLY INTERMEDIATE AT 2.9 ANGSTROMS RESOLUTION

Structural Biology Knowledgebase: 1POV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.281

Literature

Macromolecules
Sequence Display for 1POV

Classification: Virus [ VIPERdb ]

Total Structure Weight: 98015.52

Macromolecule Entities
Molecule Chains Length Organism Details
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 0 340 Enterovirus c Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 1 302 Enterovirus c Gene Name(s):
POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 3 238 Enterovirus c Mutation: F123S
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SPH
Query on SPH

1 SPHINGOSINE
C18 H37 N O2
WWUZIQQURGPMPG-MSOLQXFVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MYR
Query on MYR

0 MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.281
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 322.90 α = 90.00
b = 358.00 β = 90.00
c = 380.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-08-10
  • Released Date: 1995-12-07
  • Deposition author(s): Basavappa, R., Filman, D.J., Hogle, J.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name