1PMV

The structure of JNK3 in complex with a dihydroanthrapyrazole inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 1PMV

Classification: TRANSFERASE

Total Structure Weight: 42221.87

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 10 A 364 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK10 Gene View JNK3 JNK3A PRKM10 SAPK1B
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
537
Query on 537

A 2,6-DIHYDROANTHRA/1,9-CD/PYRAZOL-6-ONE
C14 H8 N2 O
ACPOUJIDANTYHO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
537 IC50: 40 - 14000 nM (86 - 100) BindingDB

IC50: 150 nM  BindingMOAD
IC50: 150 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.218
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 48.21 α = 90.00
b = 73.09 β = 90.00
c = 106.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-11
  • Released Date: 2003-09-09
  • Deposition author(s): Scapin, G., Patel, S.B., Lisnock, J., Becker, J.W., LoGrasso, P.V.

Revision History

  • Version 1_0: 2003-09-09

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance