1PKU

Crystal Structure of Nucleoside Diphosphate Kinase from Rice


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1PKU

Classification: TRANSFERASE

Total Structure Weight: 204473.88

Macromolecule Entities
Molecule Chains Length Organism Details
Nucleoside Diphosphate Kinase I A, B, C..., D, E, F, G, H, I, J, K, LA, B, C, D, E, F, G, H, I, J, K, L 150 Oryza sativa EC#: 2.7.4.6 IUBMB
Gene Name(s): NDKR Os07g0492000 LOC_Os07g30970 OJ1218_C12.24 OsJ_023347 P0038F10.104
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 70.95 α = 90.00
b = 182.94 β = 90.00
c = 188.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-06
  • Released Date: 2005-02-22
  • Deposition author(s): Huang, J.-Y., Chang, C.-Y., Chang, T., Chen, C.-J.

Revision History

  • Version 1_0: 2005-02-22

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2014-04-23

    Type: Experimental preparation