Macromolecules
Sequence Display for 1PFZ

Classification: ASPARTIC PROTEASE ZYMOGEN

Total Structure Weight: 171487.86

Macromolecule Entities
Molecule Chains Length Organism Details
PROPLASMEPSIN II A, B, C, D 380 Plasmodium falciparum EC#: 3.4.23.39 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, C, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.214
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 52.01 α = 90.00
b = 133.22 β = 98.45
c = 114.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-07
  • Released Date: 1999-01-13
  • Deposition author(s): Bernstein, N.K., Cherney, M.M., Loetscher, H., Ridley, R.G., James, M.N.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update