1PEW

High Resolution Crystal Structure of Jto2, a mutant of the non-amyloidogenic Lamba6 Light Chain, Jto

Structural Biology Knowledgebase: 1PEW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.252

Literature

Macromolecules
Sequence Display for 1PEW

Classification: IMMUNE SYSTEM

Total Structure Weight: 24247.77

Macromolecule Entities
Molecule Chains Length Organism Details
Jto2, a LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN, VARIABLE DOMAIN A, B 109 Homo sapiens Fragment: IMMUNOGLOBULIN LIGHT CHAIN, VARIABLE DOMAIN
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CD
Query on CD

A, B CADMIUM ION
Cd
WLZRMCYVCSSEQC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.252
  • Space Group: P 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.58 α = 90.00
b = 73.58 β = 90.00
c = 92.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-22
  • Released Date: 2004-07-13
  • Deposition author(s): Dealwis, C., Gupta, V., Wilkerson, M.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Refinement description | Details: Fixed TLS group
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values