1PEO

Ribonucleotide Reductase Protein R1E from Salmonella typhimurium

Structural Biology Knowledgebase: 1PEO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1PEO

Classification: OXIDOREDUCTASE

Total Structure Weight: 81178.41

Macromolecule Entities
Molecule Chains Length Organism Details
Ribonucleoside-diphosphate reductase 2 alpha chain A 714 Salmonella enterica EC#: 1.17.4.1 IUBMB
Gene Name(s): nrdE STM2807
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DCP
Query on DCP

A 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
C9 H16 N3 O13 P3
RGWHQCVHVJXOKC-SHYZEUOFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 98.94 α = 90.00
b = 98.94 β = 90.00
c = 289.15 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-22
  • Released Date: 2004-05-25
  • Deposition author(s): Uppsten, M., Farnegardh, M., Jordan, A., Eliasson, R., Eklund, H., Uhlin, U.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4