1PB0

YCDX PROTEIN IN AUTOINHIBITED STATE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Work: 0.164

Literature

Macromolecules
Sequence Display for 1PB0

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 82025.94

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein ycdX A, B, C 245 Escherichia coli EC#: 3.1.3 IUBMB
Gene Name(s): ycdX b1034 JW1017
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

A, B, C FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Observed:
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 134.13 α = 90.00
b = 77.33 β = 103.17
c = 82.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-14
  • Released Date: 2004-05-25
  • Deposition author(s): Teplyakov, A., Obmolova, G., Khil, P.P., Camerini-Otero, R.D., Gilliland, G.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4