1P0N

IPP:DMAPP isomerase type II, FMN complex

Structural Biology Knowledgebase: 1P0N SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 1P0N

Classification: ISOMERASE

Total Structure Weight: 75438.35

Macromolecule Entities
Molecule Chains Length Organism Details
Isopentenyl-diphosphate delta-isomerase A, B 349 Bacillus subtilis EC#: 5.3.3.2 IUBMB
Gene Name(s): fni idi ypgA BSU22870
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.219
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 115.03 α = 90.00
b = 115.03 β = 90.00
c = 139.94 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-10
  • Released Date: 2003-06-17
  • Deposition author(s): Steinbacher, S., Kaiser, J., Gerhardt, S., Eisenreich, W., Huber, R., Bacher, A., Rohdich, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values