1OWP

DATA6:photoreduced DNA pholyase / received X-rays dose 4.8 exp15 photons/mm2

Structural Biology Knowledgebase: 1OWP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1OWP

Classification: lyase

Total Structure Weight: 55412.59

Macromolecule Entities
Molecule Chains Length Organism Details
Deoxyribodipyrimidine photolyase A 484 Synechococcus elongatus EC#: 4.1.99.3 IUBMB
Gene Name(s): phr phrA syc1392_c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.206
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.74 α = 90.00
b = 89.74 β = 90.00
c = 133.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-28
  • Released Date: 2004-04-13
  • Deposition author(s): Komori, H., Adachi, S., Miki, K., Eker, A., Kort, R.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4