1OVL

Crystal Structure of Nurr1 LBD

Structural Biology Knowledgebase: 1OVL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 1OVL

Classification: TRANSCRIPTION

Total Structure Weight: 186167.44

Macromolecule Entities
Molecule Chains Length Organism Details
Orphan nuclear receptor NURR1 (MSE 414, 496, 511) A, D 271 Homo sapiens Mutation: M496M, M511M
Gene Name(s): NR4A2 Gene View NOT NURR1 TINUR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Orphan nuclear receptor NURR1 (MSE 496, 511) B, C, E, F 271 Homo sapiens Mutation: M414M, M496M, M511M
Gene Name(s): NR4A2 Gene View NOT NURR1 TINUR

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

B IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BR
Query on BR

A, B, C, D, E, F BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A, B, D, E, F POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.217
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 80.38 α = 90.00
b = 80.38 β = 90.00
c = 227.37 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-26
  • Released Date: 2003-06-03
  • Deposition author(s): Wang, Z., Liu, J., Walker, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4