1OQL

Mistletoe Lectin I from Viscum album complexed with galactose

Structural Biology Knowledgebase: 1OQL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 1OQL

Classification: HYDROLASE / SUGAR BINDING PROTEIN

Total Structure Weight: 58352.68

Macromolecule Entities
Molecule Chains Length Organism Details
MISTLETOE LECTIN I A 249 Viscum album EC#: 3.2.2.22 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
MISTLETOE LECTIN I B 263 Viscum album Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GAL
Query on GAL

B BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.199
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 107.65 α = 90.00
b = 107.65 β = 90.00
c = 311.92 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-10
  • Released Date: 2003-07-01
  • Deposition author(s): Niwa, H., Tonevitsky, A.G., Agapov, I.I., Saward, S., Pfuller, U., Palmer, R.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values