1ON0

Crystal Structure of Putative Acetyltransferase (YycN) from Bacillus subtilis, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR144

Structural Biology Knowledgebase: 1ON0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 1ON0

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 75090.59

Macromolecule Entities
Molecule Chains Length Organism Details
YycN protein A, B, C, D 158 Bacillus subtilis EC#: 2.3.1 IUBMB
Mutation: M1M, M4M, M8M, M120M, M152M
Gene Name(s): yycN BSU40290
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.225
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.89 α = 90.00
b = 101.59 β = 97.00
c = 62.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-26
  • Released Date: 2003-03-11
  • Deposition author(s): Forouhar, F., Shen, J., Kuzin, A., Chiang, Y., Xiao, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Northeast Structural Genomics Consortium (NESG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values