1OMK

The Crystal Structure of d(CACG(5IU)G)

Structural Biology Knowledgebase: 1OMK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1OMK

Classification: DNA

Total Structure Weight: 4164.44

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*AP*CP*GP*(5IU)P*G)-3' A, B 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NCO
Query on NCO

A COBALT HEXAMMINE(III)
Co H18 N6
DYLMFCCYOUSRTK-FGTKAUEHAT
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
5IU
Query on 5IU
A, B DNA LINKING C9 H12 I N2 O8 P DU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Observed:
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 18.16 α = 90.00
b = 30.03 β = 90.00
c = 41.99 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-02-25
  • Released Date: 2003-11-04
  • Deposition author(s): Schuerman, G., Van Hecke, K., Van Meervelt, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4