1OJD

HUMAN MONOAMINE OXIDASE B IN COMPLEX WITH LAURYLDIMETHYLAMINE-N-OXIDE (LDAO)

Structural Biology Knowledgebase: 1OJD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.252

Literature

Macromolecules
Sequence Display for 1OJD

Classification: OXIDOREDUCTASE

Total Structure Weight: 598533.00

Macromolecule Entities
Molecule Chains Length Organism Details
AMINE OXIDASE [FLAVIN-CONTAINING] B A, B, C..., D, E, F, G, H, I, LA, B, C, D, E, F, G, H, I, L 520 Homo sapiens EC#: 1.4.3.4 IUBMB
Gene Name(s): MAOB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Monoamine Oxidase B


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D, E, F, G, H, I, L FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LDA
Query on LDA

A, B, C, D, E, F, G, H, I, L LAURYL DIMETHYLAMINE-N-OXIDE
C14 H31 N O
SYELZBGXAIXKHU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.252
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 108.40 α = 90.14
b = 132.43 β = 90.45
c = 154.84 γ = 114.02

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-08
  • Released Date: 2003-08-15
  • Deposition author(s): Binda, C., Edmondson, D.E., Mattevi, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4