1OIO

GAFD (F17C-TYPE) FIMBRIAL ADHESIN FROM ESCHERICHIA COLI

Structural Biology Knowledgebase: 1OIO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 1OIO

Classification: LECTIN

Total Structure Weight: 39055.20

Macromolecule Entities
Molecule Chains Length Organism Details
FIMBRIAL LECTIN A, B 178 Escherichia coli Fragment: LIGAND-BINDING DOMAIN, RESIDUES 23-200
Details: 2 NAG (GLCNAC) MOLECULES PER MONOMER DISULPHIDE BETWEEN C53 AND C110
Gene Name(s): f17gG gafD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.216
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 42.99 α = 90.00
b = 70.47 β = 104.49
c = 56.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-22
  • Released Date: 2003-08-15
  • Deposition author(s): Merckel, M.C., Tanskanen, J., Edelman, S., Westerlund-Wikstrom, B., Korhonen, T.K., Goldman, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4