1OID

5'-NUCLEOTIDASE (E. COLI) WITH AN ENGINEERED DISULFIDE BRIDGE (S228C, P513C)

Structural Biology Knowledgebase: 1OID SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 1OID

Classification: HYDROLASE

Total Structure Weight: 118575.31

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN USHA A, B 532 Escherichia coli EC#: 3.1.3.5 IUBMB 3.6.1.45 IUBMB
Mutation: S228C, P513C
Gene Name(s): ushA b0480 JW0469
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.166
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 80.50 α = 90.00
b = 93.71 β = 97.71
c = 82.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-13
  • Released Date: 2004-06-10
  • Deposition author(s): Schultz-Heienbrok, R., Maier, T., Straeter, N.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4