1OGP

THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS

Structural Biology Knowledgebase: 1OGP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.235

Literature

Macromolecules
Sequence Display for 1OGP

Classification: OXIDOREDUCTASE

Total Structure Weight: 265539.91

Macromolecule Entities
Molecule Chains Length Organism Details
SULFITE OXIDASE A, B, C..., D, E, FA, B, C, D, E, F 393 Arabidopsis thaliana EC#: 1.8.3.1 IUBMB
Details: ONE MOLYBDENUMN COFACTOR IN EACH MOLECULE
Gene Name(s): SOX MCP At3g01910 F1C9.31 F28J7.38
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MTQ
Query on MTQ

A, B, C, D, E, F (MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)
C10 H8 Mo N5 O8 P S2
IXNYCVJPVGNGQC-NRYJBHHQSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CS
Query on CS

A, B, C, D, E, F CESIUM ION
Cs
NCMHKCKGHRPLCM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B, C, D, E, F GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.235
  • Space Group: C 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 222.92 α = 90.00
b = 351.27 β = 90.00
c = 158.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-08
  • Released Date: 2003-10-09
  • Deposition author(s): Schrader, N., Fischer, K., Theis, K., Mendel, R.R., Schwarz, G., Kisker, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4