1OG6

YDHF, AN ALDO-KETO REDUCTASE FROM E.COLI COMPLEXED WITH NADPH

Structural Biology Knowledgebase: 1OG6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1OG6

Classification: OXIDOREDUCTASE

Total Structure Weight: 103176.53

Macromolecule Entities
Molecule Chains Length Organism Details
HYPOTHETICAL OXIDOREDUCTASE YDHF A, B, C 298 Escherichia coli Mutation: M1L
Details: THERE IS A RATIO ONE TO ONE PROTEIN MOLECULE AND NADP
Gene Name(s): ydhF b1647 JW1639
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

A, B, C NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.207
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 174.53 α = 90.00
b = 174.53 β = 90.00
c = 97.92 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-24
  • Released Date: 2003-05-29
  • Deposition author(s): Jeudy, S., Abergel, C., Claverie, J.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4