1OBT

STRUCTURE OF RICIN A CHAIN MUTANT, COMPLEX WITH AMP

Structural Biology Knowledgebase: 1OBT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.197

Literature

Macromolecules
Sequence Display for 1OBT

Classification: GLYCOSIDASE

Total Structure Weight: 30265.19

Macromolecule Entities
Molecule Chains Length Organism Details
RICIN A CHAIN A 267 Ricinus communis EC#: 3.2.2.22 IUBMB
Mutation: R180H
Details: COMPLEXED WITH AMP
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AMP
Query on AMP

A ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.197
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 68.65 α = 90.00
b = 68.65 β = 90.00
c = 141.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-06-22
  • Released Date: 1997-06-16
  • Deposition author(s): Day, P.J., Ernst, S.R., Frankel, A.E., Monzingo, A.F., Pascal, J.M., Svinth, M., Robertus, J.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4