1OAK

CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR (VWF) A1 DOMAIN IN COMPLEX WITH THE FUNCTION BLOCKING NMC-4 FAB

Structural Biology Knowledgebase: 1OAK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1OAK

Classification: COMPLEX (WILLEBRAND / IMMUNOGLOBULIN)

Total Structure Weight: 69793.98

Macromolecule Entities
Molecule Chains Length Organism Details
NMC-4 IGG1 L 212 Mus musculus Fragment: FAB FRAGMENT, AN ANTI VON WILLEBRAND FACTOR (VWF) A1 DOMAIN
Details: THE ANTIBODY HEAVY CHAIN CONSISTS OF TWO SEGMENTS, H1 AND H2, BOTH LABELED CHAIN H IN THIS ENTRY
NMC-4 IGG1 H 223 Mus musculus Fragment: FAB FRAGMENT, AN ANTI VON WILLEBRAND FACTOR (VWF) A1 DOMAIN
Details: THE ANTIBODY HEAVY CHAIN CONSISTS OF TWO SEGMENTS, H1 AND H2, BOTH LABELED CHAIN H IN THIS ENTRY
VON WILLEBRAND FACTOR A 196 Homo sapiens Fragment: A1 DOMAIN RESIDUES 507 - 702, OR GLYCOPROTEIN IBA (A\:ALPHA) BINDING DOMAIN
Gene Name(s): VWF Gene View F8VWF
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.201
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 208.20 α = 90.00
b = 61.90 β = 108.60
c = 72.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-12-18
  • Released Date: 1998-10-21
  • Deposition author(s): Celikel, R., Varughese, K.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4