1O9V

F17-aG lectin domain from Escherichia coli in complex with a selenium carbohydrate derivative


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 1O9V

Classification: LECTIN

Total Structure Weight: 19346.42

Macromolecule Entities
Molecule Chains Length Organism Details
F17-AG LECTIN DOMAIN A 177 Escherichia coli Fragment: CARBOHYDRATE-BINDING DOMAIN, RESIDUES 23-199
Gene Name(s): f17aG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SNG
Query on SNG

A METHYL 2-ACETAMIDO-1,2-DIDEOXY-1-SELENO-BETA- D-GLUCOPYRANOSIDE
C9 H17 N O5 Se
AZZZNYGPGINRNT-OKNNCHMLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.205
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 42.76 α = 90.00
b = 42.76 β = 90.00
c = 273.76 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-20
  • Released Date: 2003-05-29
  • Deposition author(s): Buts, L., De Genst, E., Loris, R., Oscarson, S., Lahmann, M., Messens, J., Brosens, E., Wyns, L., Bouckaert, J., De Greve, H.

Revision History

  • Version 1_0: 2003-05-29

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance