1O9J

THE X-RAY CRYSTAL STRUCTURE OF ETA-CRYSTALLIN

Structural Biology Knowledgebase: 1O9J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1O9J

Classification: OXIDOREDUCTASE

Total Structure Weight: 221361.63

Macromolecule Entities
Molecule Chains Length Organism Details
ALDEHYDE DEHYDROGENASE, CYTOSOLIC 1 A, B, C, D 501 Elephantulus edwardii EC#: 1.2.1.3 IUBMB
Details: NAD COFACTOR PRESENT
Gene Name(s): ALDH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A, B, C, D NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DTT
Query on DTT

B 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DTU
Query on DTU

D (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
C4 H10 O2 S2
VHJLVAABSRFDPM-ZXZARUISSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.180
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 80.87 α = 90.00
b = 136.41 β = 102.62
c = 84.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-15
  • Released Date: 2003-04-17
  • Deposition author(s): Purkiss, A.G., Van Montfort, R., Wistow, G., Slingsby, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4