1O69

Crystal structure of a PLP-dependent enzyme

Structural Biology Knowledgebase: 1O69 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1O69

Classification: structural genomics unknown function

Total Structure Weight: 90310.05

Macromolecule Entities
Molecule Chains Length Organism Details
aminotransferase A, B 394 Campylobacter jejuni Gene Name(s): pglE ERS445056_01231
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
X04
Query on X04

A, B (2-AMINO-4-FORMYL-5-HYDROXY-6-METHYLPYRIDIN- 3-YL)METHYL DIHYDROGEN PHOSPHATE
6-AMINO-PYRIDOXAL-5'-PHOSPHATE (Synonym)
C8 H11 N2 O6 P
XHTUTGLXZYJZRY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BME
Query on BME

A, B BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.185
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 151.77 α = 90.00
b = 151.77 β = 90.00
c = 76.99 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-23
  • Released Date: 2003-11-11
  • Deposition author(s): Structural GenomiX

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values