1NZG

Crystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1NZG

Classification: DNA

Total Structure Weight: 6352.36

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*CP*GP*TP*AP*(3ME)P*AP*CP*GP*C)-3' A, B 10 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
3ME
Query on 3ME
A, B RNA LINKING C16 H28 N3 O10 P U

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 25.26 α = 90.00
b = 44.11 β = 90.00
c = 45.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-17
  • Released Date: 2003-08-26
  • Deposition author(s): Prhavc, M., Prakash, T.P., Minasov, G., Egli, M., Manoharan, M.

Revision History

  • Version 1_0: 2003-08-26

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2011-11-02

    Type: Non-polymer description