1NV9

HemK, apo structure

Structural Biology Knowledgebase: 1NV9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.239

Literature

Macromolecules
Sequence Display for 1NV9

Classification: TRANSFERASE

Total Structure Weight: 32166.21

Macromolecule Entities
Molecule Chains Length Organism Details
hemK protein A 284 Thermotoga maritima EC#: 2.1.1.297 IUBMB
Fragment: HemK
Gene Name(s): prmC TM_0488
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAH
Query on SAH

A S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.239
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.90 α = 90.00
b = 59.01 β = 90.00
c = 63.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-02
  • Released Date: 2003-05-27
  • Deposition author(s): Schubert, H.L., Phillips, J.D., Hill, C.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4