1NT2

CRYSTAL STRUCTURE OF FIBRILLARIN/NOP5P COMPLEX

Structural Biology Knowledgebase: 1NT2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.323
  • R-Value Work: 0.257

Literature

Macromolecules
Sequence Display for 1NT2

Classification: RNA BINDING PROTEIN

Total Structure Weight: 54857.54

Macromolecule Entities
Molecule Chains Length Organism Details
Fibrillarin-like pre-rRNA processing protein A 210 Archaeoglobus fulgidus Gene Name(s): flpA AF_2087
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
conserved hypothetical protein B 258 Archaeoglobus fulgidus Gene Name(s): AF_2088
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAM
Query on SAM

A S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.323
  • R-Value Work: 0.257
  • Space Group: P 42 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 125.31 α = 90.00
b = 125.31 β = 90.00
c = 87.48 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-28
  • Released Date: 2003-04-01
  • Deposition author(s): Aittaleb, M., Rashid, R., Chen, Q., Palmer, J.R., Daniels, C.J., Li, H.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Source and taxonomy | Details: Fixed scientific name and taxonomy id
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4