1NNI

Azobenzene Reductase from Bacillus subtilis

Structural Biology Knowledgebase: 1NNI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 1NNI

Classification: OXIDOREDUCTASE

Total Structure Weight: 19663.76

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical protein yhda 1 174 Bacillus subtilis Details: apc1167
Gene Name(s): azr yhdA BSU09340
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

1 FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
1 L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.221
  • Space Group: P 62 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 112.72 α = 90.00
b = 112.72 β = 90.00
c = 90.01 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-13
  • Released Date: 2003-07-29
  • Deposition author(s): Cuff, M.E., Kim, Y., Maj, L., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4