1NMQ

Extendend Tethering: In Situ Assembly of Inhibitors

Structural Biology Knowledgebase: 1NMQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.299
  • R-Value Work: 0.241

Literature

Macromolecules
Sequence Display for 1NMQ

Classification: APOPTOSIS HYDROLASE

Total Structure Weight: 58198.75

Macromolecule Entities
Molecule Chains Length Organism Details
Caspase-3 A, B 249 Homo sapiens EC#: 3.4.22.56 IUBMB
Fragment: large subunit
Gene Name(s): CASP3 Gene View CPP32
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
160
Query on 160

A, B 3-(3-{2-[(5-METHANESULFONYL-THIOPHENE-2-CARBONYL)- AMINO]-ETHYLDISULFANYLMETHYL}- BENZENESULFONYLAMINO)- 4-OXO-PENTANOIC ACID
C20 H24 N2 O8 S5
VIJJMTFSKSTKFB-INIZCTEOSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.299
  • R-Value Work: 0.241
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 68.86 α = 90.00
b = 89.04 β = 90.00
c = 96.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-10
  • Released Date: 2003-03-11
  • Deposition author(s): Erlanson, D.A., Lam, J., Wiesmann, C., Luong, T.N., Simmons, R.L., DeLano, W., Choong, I.C., Flanagan, M., Lee, D., O'Brian, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4