1NM2

"Malonyl-CoA:ACP Transacylase"

Structural Biology Knowledgebase: 1NM2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1NM2

Classification: TRANSFERASE

Total Structure Weight: 32425.78

Macromolecule Entities
Molecule Chains Length Organism Details
malonyl CoA:acyl carrier protein malonyltransferase A 317 Streptomyces coelicolor EC#: 2.3.1.39 IUBMB
Fragment: Malonyl-CoA:ACP Transacylase
Gene Name(s): fabD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACY
Query on ACY

A ACETIC ACID
C2 H4 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 43.07 α = 90.00
b = 54.49 β = 90.00
c = 109.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-08
  • Released Date: 2003-01-21
  • Deposition author(s): Keatinge-Clay, A.T., Shelat, A.A., Savage, D.F., Tsai, S., Miercke, L.J.W., O'Connell III, J.D., Khosla, C., Stroud, R.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name