1NFQ

Rv2002 gene product from Mycobacterium tuberculosis

Structural Biology Knowledgebase: 1NFQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.162

Literature

Macromolecules
Sequence Display for 1NFQ

Classification: oxidoreductase

Total Structure Weight: 112231.17

Macromolecule Entities
Molecule Chains Length Organism Details
Putative oxidoreductase Rv2002 A, B, C, D 260 Mycobacterium tuberculosis EC#: 1.1.1.53 IUBMB
Mutation: I6T, V47M, T69K
Gene Name(s): fabG3 Rv2002 MTCY39.16c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAI
Query on NAI

A, B, C, D 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NADH (Synonym)
C21 H29 N7 O14 P2
BOPGDPNILDQYTO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AOI
Query on AOI

A, B, C, D Androsterone
5beta, (Synonym)
C19 H30 O2
QGXBDMJGAMFCBF-HLUDHZFRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.162
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 122.16 α = 90.00
b = 122.16 β = 90.00
c = 141.25 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-15
  • Released Date: 2002-12-30
  • Deposition author(s): Yang, J.K., Park, M.S., Waldo, G.S., Suh, S.W., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2013-07-03
    Type: Non-polymer description | Details: update AE2 to AOI
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4