1NF0

Triosephosphate Isomerase in Complex with DHAP

Structural Biology Knowledgebase: 1NF0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 1NF0

Classification: ISOMERASE

Total Structure Weight: 53644.82

Macromolecule Entities
Molecule Chains Length Organism Details
triosephosphate isomerase A, B 247 Saccharomyces cerevisiae EC#: 5.3.1.1 IUBMB
Mutation: W90Y, W157F, W168X
Gene Name(s): TPI1 Gene View YDR050C YD9609.05C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
13P
Query on 13P

A, B 1,3-DIHYDROXYACETONEPHOSPHATE
C3 H7 O6 P
GNGACRATGGDKBX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
FTR
Query on FTR
A, B L-PEPTIDE LINKING C11 H11 F N2 O2 TRP

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.209
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 47.26 α = 90.00
b = 62.17 β = 90.00
c = 160.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-12
  • Released Date: 2003-01-07
  • Deposition author(s): Jogl, G., Rozovsky, S., McDermott, A.E., Tong, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4