1NCQ

The structure of HRV14 when complexed with pleconaril, an antiviral compound

Structural Biology Knowledgebase: 1NCQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 1NCQ

Classification: Virus [ VIPERdb ]

Total Structure Weight: 94864.56

Macromolecule Entities
Molecule Chains Length Organism Details
COAT PROTEIN VP1 A 289 Rhinovirus b Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
COAT PROTEIN VP2 B 262 Rhinovirus b Mutation: I170L
Gene Name(s):
COAT PROTEIN VP3 C 236 Rhinovirus b Gene Name(s):
COAT PROTEIN VP4 D 68 Rhinovirus b Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
W11
Query on W11

A 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5- YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE
WIN63843 (Synonym)
C18 H18 F3 N3 O3
KQOXLKOJHVFTRN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.216
  • Space Group: P 21 3

Unit Cell:

Length (Å) Angle (°)
a = 438.72 α = 90.00
b = 438.72 β = 90.00
c = 438.72 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-05
  • Released Date: 2003-12-16
  • Deposition author(s): Zhang, Y., Simpson, A.A., Bator, C.M., Chakravarty, S., Pevear, D.C., Skochko, G.A., Tull, T.M., Diana, G., Rossmann, M.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4