1NCJ

N-CADHERIN, TWO-DOMAIN FRAGMENT

Structural Biology Knowledgebase: 1NCJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.321
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 1NCJ

Classification: CELL ADHESION PROTEIN

Total Structure Weight: 23993.90

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (N-CADHERIN) A 215 Mus musculus Fragment: TWO-DOMAIN FRAGMENT
Mutation: L150V
Gene Name(s): Cdh2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IUM
Query on IUM

A URANYL (VI) ION
O2 U
IZLHQJIUOZHTLW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.321
  • R-Value Work: 0.212
  • Space Group: I 4 2 2

Unit Cell:

Length (Å) Angle (°)
a = 99.00 α = 90.00
b = 99.00 β = 90.00
c = 136.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-02-02
  • Released Date: 1999-03-18
  • Deposition author(s): Tamura, K., Shan, W.-S., Hendrickson, W.A., Colman, D.R., Shapiro, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4