1NBK

The structure of RNA aptamer for HIV Tat complexed with two argininamide molecules

Structural Biology Knowledgebase: 1NBK SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria:

Literature

Macromolecules
Sequence Display for 1NBK

Classification: RNA

Total Structure Weight: 11272.03

Macromolecule Entities
Molecule Chains Length Organism Details
RNA aptamer A 34 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GND
Query on GND

A 2-AMINO-5-GUANIDINO-PENTANOIC ACID
C6 H15 N4 O2
ODKSFYDXXFIFQN-BYPYZUCNSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: --

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2002-12-03
  • Released Date: 2003-12-03
  • Deposition author(s): Matsugami, A., Kobayashi, S., Ouhashi, K., Uesugi, S., Yamamoto, R., Taira, K., Nishikawa, S., Kumar, P.K.R., Katahira, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4