1N5A

Crystal structure of the Murine class I Major Histocompatibility Complex of H-2DB, B2-Microglobulin, and A 9-Residue immunodominant peptide epitope gp33 derived from LCMV


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.251

Literature

Macromolecules
Sequence Display for 1N5A

Classification: IMMUNE SYSTEM

Total Structure Weight: 179349.17

Macromolecule Entities
Molecule Chains Length Organism Details
H-2 class I histocompatibility antigen, D-B alpha chain A, D, G, J 276 Mus musculus Fragment: Extracellular part
Gene Name(s): H2-D1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B, E, H, K 99 Mus musculus Gene Name(s): B2m
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
nonameric peptide, gp33 derived from lymphocytic choriomeningitis virus C, F, I, L 9 Lymphocytic choriomeningitis mammarenavirus Mutation: C9M
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.251
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 92.00 α = 90.00
b = 122.66 β = 103.34
c = 99.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-05
  • Released Date: 2003-01-07
  • Deposition author(s): Achour, A., Michaelsson, J., Harris, R.A., Odeberg, J., Grufman, P., Sandberg, J.K., Levitsky, V., Karre, K., Sandalova, T., Schneider, G.

Revision History

  • Version 1_0: 2003-01-07

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Version format compliance