1N10

Crystal Structure of Phl p 1, a Major Timothy Grass Pollen Allergen

Structural Biology Knowledgebase: 1N10 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.239

Literature

Macromolecules
Sequence Display for 1N10

Classification: ALLERGEN

Total Structure Weight: 52973.98

Macromolecule Entities
Molecule Chains Length Organism Details
Pollen allergen Phl p 1 A, B 241 Phleum pratense Mutation: G1001A
Gene Name(s): PHLPI
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.239
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.69 α = 90.00
b = 65.53 β = 90.00
c = 144.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-10-16
  • Released Date: 2003-01-28
  • Deposition author(s): Fedorov, A.A., Ball, T., Leistler, B., Valenta, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update