1MZF

Human Factor inhibiting HIF (FIH1) in Complex with 2-oxoglutarate

Structural Biology Knowledgebase: 1MZF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.232

Literature

Macromolecules
Sequence Display for 1MZF

Classification: OXIDOREDUCTASE

Total Structure Weight: 40658.78

Macromolecule Entities
Molecule Chains Length Organism Details
factor inhibiting HIF1 A 351 Homo sapiens EC#: 1.14.11.30 IUBMB 1.14.11.n4 IUBMB
Gene Name(s): HIF1AN Gene View FIH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AKG
Query on AKG

A 2-OXOGLUTARIC ACID
C5 H6 O5
KPGXRSRHYNQIFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.232
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.46 α = 90.00
b = 86.46 β = 90.00
c = 147.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-10-07
  • Released Date: 2002-11-20
  • Deposition author(s): Dann III, C.E., Bruick, R.K., Deisenhofer, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values