1MPW

Molecular Recognition in (+)-a-Pinene Oxidation by Cytochrome P450cam

Structural Biology Knowledgebase: 1MPW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 1MPW

Classification: OXIDOREDUCTASE

Total Structure Weight: 94772.39

Macromolecule Entities
Molecule Chains Length Organism Details
CYTOCHROME P450CAM A, B 414 Pseudomonas putida EC#: 1.14.15.1 IUBMB
Mutation: F87W, Y96F, V247L, C334A
Gene Name(s): camC cyp101
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TMH
Query on TMH

A, B (+)-alpha-Pinene
6, (Synonym)
C10 H16
GRWFGVWFFZKLTI-RKDXNWHRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A, B POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TMH N/A in BindingDB
Kd: 1100 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.204
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.90 α = 90.00
b = 62.52 β = 90.28
c = 95.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-13
  • Released Date: 2002-10-09
  • Deposition author(s): Bell, S.G., Chen, X., Sowden, R.J., Xu, F., Willams, J.N., Wong, L.-L., Rao, Z.

Revision History

  • 2014-12-31
    Type: Non-polymer description | Details: update ligand name and add synonym
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4