1MN3

Cue domain of yeast Vps9p

Structural Biology Knowledgebase: 1MN3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.244

Literature

Macromolecules
Sequence Display for 1MN3

Classification: PROTEIN TRANSPORT

Total Structure Weight: 6222.88

Macromolecule Entities
Molecule Chains Length Organism Details
Vacuolar protein sorting-associated protein VPS9 A 54 Saccharomyces cerevisiae Fragment: Cue domain (residues 398-451)
Mutation: M419M, M423M, G440E
Gene Name(s): VPS9 VPT9 YML097C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.244
  • Space Group: P 65 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.49 α = 90.00
b = 70.49 β = 90.00
c = 61.38 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-04
  • Released Date: 2003-06-10
  • Deposition author(s): Prag, G., Misra, S., Jones, E., Ghirlando, R., Davies, B.A., Horazdovsky, B.F., Hurley, J.H.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4