1MMP

MATRILYSIN COMPLEXED WITH CARBOXYLATE INHIBITOR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.180

Literature

Macromolecules
Sequence Display for 1MMP

Classification: METALLOPROTEASE

Total Structure Weight: 38788.90

Macromolecule Entities
Molecule Chains Length Organism Details
GELATINASE A A, B 170 Homo sapiens EC#: 3.4.24.23 IUBMB
Gene Name(s): MMP7 Gene View MPSL1 PUMP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RSS
Query on RSS

A, B 5-METHYL-3-(9-OXO-1,8-DIAZA-TRICYCLO[10.6.1.013,18]NONADECA- 12(19),13,15,17-TETRAEN-10-YLCARBAMOYL)-HEXANOIC ACID
C25 H35 N3 O4
AKWKBACKRMYPRV-NQIIRXRSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RSS Ki: 850 nM (100) BindingDB

Ki: 850 nM  BindingMOAD
Ki: 850 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Observed: 0.180
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 62.00 α = 90.00
b = 62.00 β = 90.00
c = 175.70 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-03-22
  • Released Date: 1996-04-03
  • Deposition author(s): Browner, M.F., Smith, W.W., Castelhano, A.L.

Revision History

  • 2008-03-03
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance