1M6Z

Crystal structure of reduced recombinant cytochrome c4 from Pseudomonas stutzeri


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.140

Literature

Macromolecules
Sequence Display for 1M6Z

Classification: ELECTRON TRANSPORT

Total Structure Weight: 84054.60

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome c4 A, B, C, D 190 Pseudomonas stutzeri Gene Name(s): cc4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A, B, C, D HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TRS
Query on TRS

D 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, C GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.191
  • R-Value Work: 0.140
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 75.11 α = 90.00
b = 57.56 β = 104.32
c = 83.75 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-18
  • Released Date: 2003-09-16
  • Deposition author(s): Noergaard, A., Harris, P., Larsen, S., Christensen, H.E.M.

Revision History

  • Version 1_0: 2003-09-16

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance